openapi: 3.0.3
info:
title: CYTOCON API
description: |
This API allows access to **CYTOCON DB** (**C**ell and c**YTO**kine**CON**centrations **D**ata**B**ase),
a manually curated online database containing baseline of cells and cytokines concentrations in different tissues of
both healthy individuals and patients suffering from various pathologies.
**Important!** In order to make a query, all parameters must be chosen from the database dictionaries.
termsOfService: https://cytocon-open.insysbio.com/TermOfUse
contact:
email: support@insysbio.com
license:
name: Apache 2.0
url: http://www.apache.org/licenses/LICENSE-2.0.html
version: 1.0.0
externalDocs:
description: Find out more about CYTOCON
url: https://cytocon.insysbio.com/Index.aspx
servers:
- url: https://cytocon.insysbio.com/api/v1
tags:
- name: diseases
description: List of disease names
- name: tissues_types
description: Tissues types
- name: species
description: Species types
- name: markers
description: Cells markers
- name: patient_group_attributes
description: Patient groups attributes
- name: disease_attributes
description: Disease attributes
- name: query_data
description: Query result data
- name: query_data_headers
description: Query headers data
paths:
/diseases:
get:
tags:
- diseases
summary: |
Return full list of the diseases to be used in Query (optional parameter for query).
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/Disease'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:diseases
/tissues_types:
get:
tags:
- tissues_types
summary: |
Return list of tissue types (compartments where cells or molecules measured) to be used in Query (optional parameter for query).
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/TissueType'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:tissues_types
/species:
get:
tags:
- species
summary: |
Return list of Species (names for cells and molecules) to be used in Query
(mandatory parameter for query).
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/Species'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:species
/markers:
get:
tags:
- markers
summary: |
Return list of Markers to be used in Query (optional parameter for query).
Users can refine searches for cell concentrations by specifying cell markers
(e.g. CD4+ and IL4+ for T-helper type 2 cells).
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/Marker'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:marker
/patient_group_attributes:
get:
tags:
- patient_group_attributes
summary: |
Return list of patient group attributes. Required for query result output.
The results of queries may include demographic information such as age, race, gender,
and other details, such as the number of patients in the study, if the source provides such information.
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/PatientGroupAttribute'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:patient_group_attributes
/disease_attributes:
get:
tags:
- disease_attributes
summary: |
Return list of Disease attributes. Required for query result output.
The results of queries may include disease-specific clinical measures,
e.g. Forced Expiratory Volume (FEV1) for Asthma; SLEDAI 2K range, interferon signature
for Systemic Lupus Erythematosus (SLE); SCORAD range, severity, IgE concentration range for Atopic Dermatitis.
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/DiseaseAttribute'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:disease_attributes
/query_data_headers:
get:
parameters:
- name: diseases
in: query
description: 'list of diseases names separated by "," choosed query list. "OR" logical operator'
schema:
type: string
tags:
- query_data_headers
summary: |
Return list with query header output according to parameters provided.
There one parameter, where "Diseases" is optional. Multiple inputs can be selected, but currently,
only the "OR" logic is supported.
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/QueryDataHeader'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:query_data_headers
/query_data:
get:
parameters:
- name: species
in: query
description: 'list of species names separated by "," choosed species list. "OR" logical operator'
required: true
schema:
type: string
- name: tissue_types
in: query
description: 'list of tissues names separated by "," choosed tissue_types list. "OR" logical operator'
schema:
type: string
- name: diseases
in: query
description: 'list of diseases names separated by "," choosed query list. "OR" logical operator'
schema:
type: string
- name: markers
in: query
description: 'list of markers names separated by "," choosed markers list. "OR" logical operator'
schema:
type: string
- name: wstatSwitch
in: query
description: 'true - only weighted result or false - all data without weighted result'
schema:
type: string
- name: headers
in: query
description: 'comma separated list of params to output to result'
schema:
type: string
tags:
- query_data
summary: |
Return list with query output according to parameters provided.
There are a total of four parameters, where "Species" is mandatory, and "Tissue types", "Diseases",
and "Cell markers" are optional. Multiple inputs can be selected for all parameters, but currently,
only the "OR" logic is supported.
responses:
'200':
description: successful operation
content:
application/json:
schema:
type: array
items:
$ref: '#/components/schemas/QueryData'
'400':
description: Invalid status value. This response appears when the required object does not exist in the DB.
security:
- cytocon_auth:
- read:query_data
components:
schemas:
Disease:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
example: Asthma
description: Disease name available
TissueType:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
description: Tissue name available
example: Lymph node
Species:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
description: Species name available
example: T-cells
Marker:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
description: Cells marker available
example: CD4+
PatientGroupAttribute:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
description: Patient group name used
example: Patient number
DiseaseAttribute:
required:
- name
- id
type: object
properties:
id:
type: integer
format: int64
example: 10
name:
type: string
description: Disease attribute name used
example: Cancer stage (I-IV)
QueryDataHeader:
type: object
properties:
ColumnVariable:
type: string
description: 'column variable name'
ColumnDesc:
type: string
description: 'column description'
QueryData:
required:
- s_name
- s_val
- u_base
type: object
properties:
s_name:
type: string
description: Species name (Cell or molecule names)
example: T-cells
s_unf_val:
type: string
description: Species value arithmetic mean (Concentration in unified form of avarage in database. Dimension in pM or k cell/L)
example: 1498528
s_disp_unf:
type: string
description: Species standard deviation (Unified form of dispersion in database. Dimension in pM or k cell/L)
example: 190396
markers:
type: string
description: Cell markers (List of markers associated with cells)
example: CD3+
s_val:
type: string
description: Species value (Concentration in unified units. Dimension in pM or k cell/L)
example: 1498528
s_val_isf:
type: string
description: Species value in ISF (Concentration in unified units (pM or kcell/L) recalculated regarded interstitial fluid volume)
example: NA
s_disp_left:
type: string
description: Species dispersion left (Left border in unified units. Dimension in pM or k cell/L)
example: 60208
s_disp_right:
type: string
description: Species dispersion right (Right border in unified units. Dimension in pM or k cell/L)
example: NA
s_disp_min:
type: string
description: Species min value (Minimum value in unified units. Dimension in pM or k cell/L)
example: NA
s_disp_max:
type: string
description: Species max value (Maximum value in unified units. Dimension in pM or k cell/L)
example: NA
s_val_org:
type: string
description: Species value (original). Original value from source
example: 67.2
s_disp_left_org:
type: string
description: Species dispersion left(original). Original value from source
example: 2.7
s_disp_right_org:
type: string
description: Species dispersion right(original). Original value from source
example: NA
s_disp_min_org:
type: string
description: Species min value(original). Original value from source
example: NA
s_disp_max_org:
type: string
description: Species max value(original). Original value from source
example: NA
u_base:
type: string
description: Unified units (pM or kcell/L)
example: kcells/L
u_org:
type: string
description: Original unit (unit from source)
example: '%__Lymphocytes_Blood_Atopic dermatitis'
u_rcl_ass:
type: string
description: Recalculation assumptions. If we recalculate the original value (e.g. due to a misprint in the paper or when we need calculate exact number from % using external data), we explicitly explain how and why the recalculation was performed
example: Exact number calculated from % using averaged concentration of the maternal cell in the tissue and the disease from CYTOCON DB data
tissue_t:
type: string
description: Tissue type
example: Blood
disease:
type: string
description: Disease
example: Atopic dermatitis
avg_t:
type: string
description: Average type
example: Mean
disp_t:
type: string
description: Dispersion type
example: SEM
exp_m:
type: string
description: Experimental method
example: FACS (Fluorescence-activated cell sorting)
id_type:
type: string
description: ID type (ID for original source (e.g. PMID))
example: PMID
id_val:
type: string
description: ID value
example: 15932386
link:
type: string
description: Link to place in paper where value was found
example: Table 2, p.949
source:
type: string
description: Source type (e.g paper, book, etc.)
example: Article
pg_desc:
type: string
description: Patient group description
example: All patients suffered from an acute exacerbation of their AD and were treated with pimecrolimus cream 1% twice daily for 3 weeks
pg_sg:
type: string
description: Patient group is subgroup. If a value is extracted in addition to the overall value from a large cohort (e.g., the paper presents data for all patients, then divides it by males and females), we indicate this
example: No
has_misprint:
type: string
description: If we detect a misprint (e.g., incorrect dimensions), we indicate it
example: No
sv_desc:
type: string
description: Species values description (additional information that can be useful for users about this value)
example: NA
pgAttr1:
type: string
description: 'race/ethnicity or group of races of patients'
pgAttr2:
type: string
description: 'number of males in patient group'
pgAttr3:
type: string
description: 'number of females in patient group'
pgAttr4:
type: string
description: 'Average age of the patient group'
pgAttr10:
type: string
description: 'any other attributes of patient group'
pgAttr11:
type: string
description: 'Patient number in the group'
pgAttr15:
type: string
description: 'Patient weight in kg'
pgAttr16:
type: string
description: 'Patient BMI (body mass index) in kg/m2'
pgAttr17:
type: string
description: 'Patient group average height'
pgAttr18:
type: string
description: 'Patient Smoking status'
pgAttr21:
type: string
description: 'Fasting before blood draw (hours)'
pgAttr22:
type: string
description: 'Exclusion criteria for patient group'
pgAttr23:
type: string
description: 'Inclusion criteria for patients'
pgAttr24:
type: string
description: 'Information about treatment'
pgAttr25:
type: string
description: 'additional diagnoses'
pgAttr26:
type: string
description: 'Samples number of the patient group'
pgAttr27:
type: string
description: 'Patient drinking history'
pgAttr28:
type: string
description: 'Alcohol history'
pgAttr29:
type: string
description: 'Waist-Hip Ratio (WHR)'
pgAttr30:
type: string
description: 'Erythrocyte sedimentation rate'
pgAttr31:
type: string
description: 'blood groups'
pgAttr32:
type: string
description: 'Waist circumference i.e. for patients with diabet'
dsAttr1:
type: string
description: 'SCORing Atopic Dermatitis'
dsAttr4:
type: string
description: 'Severity of the disease'
dsAttr7:
type: string
description: 'Atopic dermatitis type'
dsAttr8:
type: string
description: 'Atopic dermatitis phase'
dsAttr14:
type: string
description: 'Forced expiratory volume in 1 second, spirometry characteristic'
dsAttr15:
type: string
description: 'Global initiative for chronic Obstructive Lung Disease (GOLD) criteria'
dsAttr16:
type: string
description: 'High/Low level of IFN1 gene expression'
dsAttr17:
type: string
description: 'SLEDAI 2K score'
dsAttr18:
type: string
description: 'Glucocorticosteroids dose'
dsAttr19:
type: string
description: 'Glucocorticosteroids dose'
dsAttr20:
type: string
description: 'Immunoglobulin E specific concentration'
dsAttr21:
type: string
description: 'Immunoglobulin E total concentration'
dsAttr25:
type: string
description: 'Active/inactive stage of the disease'
dsAttr26:
type: string
description: 'Cancer stage (I-IV)'
dsAttr27:
type: string
description: 'T stage of cancer (TNM)'
dsAttr28:
type: string
description: 'N stage of cancer (TNM)'
dsAttr29:
type: string
description: 'M stage of cancer (TNM)'
dsAttr30:
type: string
description: 'peak expiratory flow'
dsAttr31:
type: string
description: 'fraction of exhaled NO'
dsAttr33:
type: string
description: 'Number of patients using prescribed ICS regularly and properly'
dsAttr34:
type: string
description: 'Daily dose of ICS'
dsAttr35:
type: string
description: 'airway resistance'
dsAttr36:
type: string
description: 'Crohn’s Disease Activity Index (CDAI)'
dsAttr37:
type: string
description: 'Disease duration'
dsAttr55:
type: string
description: 'objective SCORAD'
dsAttr56:
type: string
description: 'TEWL g/m2/h'
dsAttr57:
type: string
description: 'Pruritus score'
dsAttr58:
type: string
description: 'Sleep loss'
dsAttr59:
type: string
description: 'Extent (%) - affected Body Surface Area (BSA)'
dsAttr60:
type: string
description: 'CDLQI - Children’s Dermatology Life Quality Index'
dsAttr61:
type: string
description: 'SH (Skin Hydration) measured on Corneometer CM 825'
dsAttr62:
type: string
description: 'FEV1 % of the patient divided by the average FEV1% in the population for any person of similar age, sex, and body composition'
dsAttr63:
type: string
description: '% reversibility of asthma'
dsAttr64:
type: string
description: 'Provocation concentration (PC) that results in a 20% fall in the forced expiratory volume in 1 second (FEV1)'
dsAttr65:
type: string
description: 'The provocative dose of methacholine causing a ≥20% fall in FEV1 (PD20)'
dsAttr66:
type: string
description: 'Wheal diameter induced by allergen (mm)'
dsAttr67:
type: string
description: 'Status asthmaticus existence'
dsAttr68:
type: string
description: 'FEV1 before salbutamol (% predicted)'
dsAttr69:
type: string
description: 'FEV1 after salbutamol (% predicted)'
dsAttr70:
type: string
description: 'Astma severity score'
dsAttr71:
type: string
description: 'for PMID 24800011'
dsAttr72:
type: string
description: 'Psoriasis Area Severity Index'
dsAttr73:
type: string
description: 'System developed and validated by the EULAR to measure the progress and improvement of Rheumatoid Arthritis'
dsAttr74:
type: string
description: 'Severity score for acute allergic reactions'
dsAttr75:
type: string
description: 'Cancer stage for mixed groups'
dsAttr76:
type: string
description: 'Tumor histological grade'
dsAttr77:
type: string
description: 'Sarcoidosis stages (chest radiograph stages (Scadding criteria))'
dsAttr78:
type: string
description: 'Performance status (Eastern Cooperative Oncology Group)'
dsAttr79:
type: string
description: 'Harvey–Bradshaw Index'
dsAttr80:
type: string
description: 'Endoscopic activity score (Rutgeerts)'
dsAttr81:
type: string
description: 'Clinical activity index (Mayo)'
dsAttr82:
type: string
description: 'Endoscopic activity score (Mayo)'
dsAttr83:
type: string
description: 'Clark''s level is a staging system, which describes the level of anatomical invasion of the melanoma in the skin'
dsAttr84:
type: string
description: 'Systemic Lupus Erythematosus Disease Activity Index'
dsAttr85:
type: string
description: 'Systemic Lupus International Collaborating Clinics/ACR Damage Index; SDI'
dsAttr86:
type: string
description: 'Anti-dsDNA: anti-double-stranded DNA'
dsAttr87:
type: string
description: 'Mini Mental State Examination (MMSE) score'
dsAttr88:
type: string
description: 'SLE disease activity score [ECLAM]'
dsAttr89:
type: string
description: 'APOE E4 carrier or non-carrier (% of patients))'
dsAttr90:
type: string
description: 'ISN/RPS (International Society of Nephrology/Renal Pathology Society) class'
dsAttr91:
type: string
description: 'chronicity index (CI)'
dsAttr92:
type: string
description: 'Expanded Disability Status score'
dsAttr93:
type: string
description: 'W.H.O. grade of cancer'
dsAttr94:
type: string
description: 'Systemic Lupus Activity Measure (SLAM)'
dsAttr95:
type: string
description: 'compensated and decompensated phases'
dsAttr96:
type: string
description: 'Histological activity index for hepatitis'
dsAttr97:
type: string
description: 'Period of infection disease'
dsAttr98:
type: string
description: 'Fibrosis stage for hepatitis B'
dsAttr99:
type: string
description: 'Inflammation grade for chronic hepatitis B'
dsAttr100:
type: string
description: 'for chronic hepatitis B'
dsAttr101:
type: string
description: 'for chronic hepatitis B'
dsAttr102:
type: string
description: 'Anti-dsDNA/reference anti-dsDNA ratio'
dsAttr103:
type: string
description: 'Necroinflammation grading for CHB'
dsAttr104:
type: string
description: 'Hepatitis B e antigen seropositivity'
dsAttr105:
type: string
description: 'hepatitis B core antigen Expression Patterns in Hepatocyte'
dsAttr106:
type: string
description: 'HBsAg Expression Patterns in Hepatocyte'
dsAttr107:
type: string
description: 'For hepatitis'
dsAttr108:
type: string
description: 'HBsAg seropositivity'
dsAttr109:
type: string
description: 'Glomerulonephritis class I-V'
dsAttr110:
type: string
description: 'For Lupus nephritis was added'
dsAttr111:
type: string
description: 'For IgA nephropathy'
dsAttr112:
type: string
description: 'parenchymal liver disease (PLD) score'
dsAttr113:
type: string
description: 'a system for assessing the prognosis of chronic liver disease, primarily cirrhosis'
dsAttr114:
type: string
description: 'Clinical dementia rating (CDR)'
dsAttr115:
type: string
description: 'Activity of inflammation for chronic hepatitis B'
dsAttr116:
type: string
description: 'Hepatitis C Virus genotype'
dsAttr117:
type: string
description: 'Hepatitis B Virus genotype'
dsAttr118:
type: string
description: 'International Federation of Gynecology and Obstetrics clinical stage for uteric cervical cancer'
dsAttr119:
type: string
description: 'Tumor differentiation status'
dsAttr120:
type: string
description: 'Lymph node metastasis existence'
dsAttr121:
type: string
description: 'For Uterine cervical cancer'
dsAttr122:
type: string
description: 'Cancer vasoinvasion existence'
dsAttr124:
type: string
description: 'Human papillomavirus positive/negative'
dsAttr125:
type: string
description: 'Larsen grade value'
dsAttr126:
type: string
description: 'anti-CCP antibody in plasma'
dsAttr127:
type: string
description: 'Anti-HBe antigen in serum for chronic hepatitis B'
dsAttr128:
type: string
description: 'for chronic hepatitis C, HCV-DNA in blood'
dsAttr129:
type: string
description: 'for Rheumatoid arthritis'
dsAttr130:
type: string
description: 'Kellgren-Lawrence grading scale'
dsAttr131:
type: string
description: 'for Rheumatoid arthritis according to DAS28'
dsAttr132:
type: string
description: 'Rheumatoid factor (RF) seropositivity'
dsAttr133:
type: string
description: 'for Rheumatoid arthritis'
dsAttr134:
type: string
description: 'Percent of Non-survivors (i.e. for COVID-19)'
dsAttr135:
type: string
description: 'For Ulderative colitis according to Lichtiger'
dsAttr136:
type: string
description: 'Marburg cancer stage or SCLC'
dsAttr137:
type: string
description: 'For Crohn''s disease'
dsAttr138:
type: string
description: 'Crohn’s Disease Endoscopic Index of Severity (CDEIS)'
dsAttr139:
type: string
description: 'Oral lichen planus type'
dsAttr140:
type: string
description: 'Tumor histology type'
dsAttr141:
type: string
description: 'Her2 expression i.e. for breast cancer'
dsAttr142:
type: string
description: 'Lymphovascular space invasion existence i.e. for Cervical cancer'
dsAttr143:
type: string
description: 'for colorectal cancer'
dsAttr144:
type: string
description: 'Progesteron receptor expression on tumor cells (for breast cancer)'
dsAttr145:
type: string
description: 'Estrogen receptor status for breast cancer'
dsAttr146:
type: string
description: 'Simple Endoscopy Severity'
dsAttr147:
type: string
description: 'Global Initiative for Asthma (GINA)'
dsAttr148:
type: string
description: 'recommended by GINA'
dsAttr149:
type: string
description: 'the tendency to produce an exaggerated IgE immune response to otherwise harmless substances in the environment'
dsAttr150:
type: string
description: 'Harvey-Bradshaw Index'
dsAttr151:
type: string
description: 'Endoscopic severity (Mayo)'
dsAttr152:
type: string
description: 'Positive and Negative Syndrome Scale (PANSS) for schizophrenia'
dsAttr153:
type: string
description: 'severity of depressive symptoms'
dsAttr154:
type: string
description: 'Acute Physiology and Chronic Health Evaluation'
dsAttr155:
type: string
description: 'for HCC'
dsAttr156:
type: string
description: 'Distant metastasis existence, i.e. extrahepatic metastasis for HCC'
dsAttr157:
type: string
description: 'for arthritis'
dsAttr158:
type: string
description: 'Antinuclear antibody (ANA)-seropositivity i.e. for arthritis'
dsAttr159:
type: string
description: 'HLA-B27 seropositivity i.e. for arthritis'
dsAttr160:
type: string
description: 'American Society of Reproductive Medicine (ASRM) classification of endometriosis'
dsAttr161:
type: string
description: 'Phase of the menstrual cycle'
dsAttr162:
type: string
description: 'For prostate cancer'
dsAttr163:
type: string
description: 'The Behcet’s Disease Current Activity Form (BDCAF) transformed index'
dsAttr164:
type: string
description: 'PSI, pneumonia severity index'
dsAttr165:
type: string
description: 'SOFA, Sepsis-related organ failure assessment score'
dsAttr166:
type: string
description: 'SAPS, simplified acute physiology score'
dsAttr167:
type: string
description: 'For Lymphoma'
dsAttr168:
type: string
description: 'For Lymphoma'
dsAttr169:
type: string
description: 'For Lymphoma'
dsAttr170:
type: string
description: 'PCDAI = pediatric Crohn''s disease activity index'
dsAttr171:
type: string
description: 'PUCAI = pediatric ulcerative colitis activity index'
dsAttr172:
type: string
description: 'For Hodgkin''s Lymphoma'
dsAttr173:
type: string
description: 'For Lymphoma'
dsAttr174:
type: string
description: 'For Lymphoma'
dsAttr175:
type: string
description: 'Clinical outcome of the disease'
dsAttr176:
type: string
description: 'For diabets, glycated hemoglobin'
dsAttr177:
type: string
description: 'for COVID-19'
dsAttr178:
type: string
description: 'for IBD'
dsAttr179:
type: string
description: 'For UC'
dsAttr180:
type: string
description: 'for UC'
dsAttr181:
type: string
description: 'Simple endoscopic score for CD'
dsAttr182:
type: string
description: 'For CD'
dsAttr183:
type: string
description: 'for NSCLC'
dsAttr184:
type: string
description: 'for disease severity PMID32979941,p.e3'
dsAttr185:
type: string
description: 'Tumor size (cm)'
dsAttr186:
type: string
description: 'Tumor Infiltrating Lymphocytes PD-L1 expression (for breast cancer)'
dsAttr187:
type: string
description: 'Tumor cell PD-L1 expression (for breast cancer)'
dsAttr188:
type: string
description: 'For AML, French-American-British (FAB) classification system is based on morphology to define specific immunotypes'
dsAttr189:
type: string
description: 'St Gallen 2015 International Expert Consensus for Breast cancer'
dsAttr190:
type: string
description: 'DASO (Days after symptom onset)'
dsAttr191:
type: string
description: 'for COVID-19'
dsAttr192:
type: string
description: 'Breslow thickness is the measurement of the depth of the melanoma from the surface of your skin down through to the deepest poin'
dsAttr193:
type: string
description: 'for COVID-19'
dsAttr194:
type: string
description: 'for MDS'
dsAttr195:
type: string
description: 'Hamilton depression rating scale, without suicide ideation item'
dsAttr196:
type: string
description: 'Buss Perry aggression questionnaire'
dsAttr197:
type: string
description: 'for COVID-19'
dsAttr198:
type: string
description: 'qSOFA, quick Sequential Organ Failure Assessment'
dsAttr199:
type: string
description: 'CMI, Charlson Comorbidity Index'
dsAttr200:
type: string
description: 'anti-HBs seropositivity'
dsAttr201:
type: string
description: 'Model for end-stage liver disease (MELD) scores'
dsAttr202:
type: string
description: 'HBc-antibody seropositivity'
dsAttr203:
type: string
description: 'for COVID-19'
dsAttr204:
type: string
description: 'for Multiple sclerosis and others'
dsAttr205:
type: string
description: 'for Multiple sclerosis'
dsAttr206:
type: string
description: 'Aneurysmal diameter'
dsAttr207:
type: string
description: 'for aneurysma'
dsAttr208:
type: string
description: 'for strokes'
dsAttr209:
type: string
description: 'a cumulative and weighted index used to assess disease activity across 24 different disease descriptors in patients with SLE'
dsAttr210:
type: string
description: 'measures the overall response to treatment as assessed by the physician'
dsAttr211:
type: string
description: 'for COVID-19'
dsAttr212:
type: string
description: 'for Multiple myeloma'
dsAttr213:
type: string
description: 'for Multiple myeloma'
dsAttr214:
type: string
description: 'ECOG Eastern Cooperative Oncology Group'
dsAttr215:
type: string
description: 'alpha smooth muscle actin - for Pancreatic cancer'
dsAttr216:
type: string
description: 'For Pancreatic cancer'
dsAttr217:
type: string
description: 'HCV-Ab seropositivity'
dsAttr218:
type: string
description: 'for HCC'
dsAttr219:
type: string
description: 'BCLC stage, the Barcelona Clinic Liver Cancer stage'
dsAttr220:
type: string
description: 'a method for assessing β-cell function and insulin resistance (IR) from basal (fasting) glucose and insulin or C-peptide concent'
dsAttr221:
type: string
description: 'for HCC'
dsAttr222:
type: string
description: 'bleeding scale '
dsAttr223:
type: string
description: 'for HCC'
dsAttr224:
type: string
description: 'estimating the risk of short-term mortality from actual clinical data in the first day after admission'
dsAttr225:
type: string
description: 'Bone Lesion Score'
dsAttr226:
type: string
description: '(positive/negative)'
dsAttr227:
type: string
description: 'for Gastric cancer'
dsAttr228:
type: string
description: 'for Crohn Disease'
dsAttr229:
type: string
description: 'for Crohn disease'
dsAttr230:
type: string
description: 'for Crohn Disease'
dsAttr231:
type: string
description: 'Stage 1: Infection ; Stage 2: Asymptomatic ; Stage 3: Symptomatic ; Stage 4: AIDS/Progression of HIV to AIDS.'
dsAttr232:
type: string
description: 'Forced Ventilatory Capacity'
dsAttr233:
type: string
description: 'Total Lung Capacity'
dsAttr234:
type: string
description: 'Diffusion capacity of the Lung for Carbon monoxide corrected for hemoglobin level'
dsAttr235:
type: string
description: 'Disease Activity Score 28 joints combined with CRP value'
dsAttr236:
type: string
description: 'for Multiple sclerosis - an MS relapse, flare-up, or exacerbation'
dsAttr237:
type: string
description: 'for coeliac disease'
dsAttr238:
type: string
description: 'for Coeliac disease'
dsAttr239:
type: string
description: 'Kirsten rat sarcoma viral oncogene homologue (KRAS) is the best-known oncogene'
dsAttr240:
type: string
description: 'EGFR mutation'
dsAttr241:
type: string
description: 'Tumor location'
dsAttr242:
type: string
description: 'Marsh Classification of histologic findings in celiac disease (Oberhuber)'
dsAttr243:
type: string
description: 'For RA and PsA'
dsAttr244:
type: string
description: 'For RA and PsA'
dsAttr245:
type: string
description: 'Larsen score for RA (0–4)'
dsAttr246:
type: string
description: 'Radiological score of sacroileitis for PsA (0–4)'
dsAttr247:
type: string
description: 'BASDAI Bath Ankylosing Spondylitis Disease Activity Index'
dsAttr248:
type: string
description: 'MASES Maastricht Ankylosing Spondylitis Enthesitis Score'
dsAttr249:
type: string
description: 'For COPD'
dsAttr250:
type: string
description: 'MSSS (multiple sclerosis severity score)'
dsAttr251:
type: string
description: 'TJC68'
dsAttr252:
type: string
description: 'SJC66'
dsAttr253:
type: string
description: 'MRss, modified Rodnan skin score'
dsAttr254:
type: string
description: 'the sum of the size of the largest tumor in cm and the total number of tumors in the absence of tumor microvascular invasion.'
dsAttr255:
type: string
description: 'the small number of cancer cells in the body after cancer treatment. An MRD positive test result means that disease was still de'
dsAttr256:
type: string
description: 'Multiple Sclerosis Impact Scale 29'
dsAttr257:
type: string
description: 'Multiple Sclerosis Impact Scale 29,'
dsAttr258:
type: string
description: 'Symbol Digit Modalities Test'
dsAttr259:
type: string
description: 'Ophthalmopathy'
dsAttr260:
type: string
description: 'degree of goiter'
dsAttr261:
type: string
description: 'for Graves disease'
dsAttr262:
type: string
description: 'I (0–1 point), II (2–3 points), and III (4–6 points)'
dsAttr263:
type: string
description: 'For arthritits'
dsAttr264:
type: string
description: 'for IgG4-related disease'
dsAttr265:
type: string
description: 'for IgG4-Related disease'
dsAttr266:
type: string
description: 'ELF score (enhanced liver fibrosis)'
dsAttr267:
type: string
description: 'Disease Activity Score-28 for Rheumatoid Arthritis with ESR'
dsAttr268:
type: string
description: 'Ankylosing Spondylitis Disease Activity Score'
dsAttr269:
type: string
description: 'BASFI functional index'
dsAttr270:
type: string
description: 'BASMI measurement index'
dsAttr271:
type: string
description: 'For RA - CDAI'
dsAttr272:
type: string
description: 'The Dermatology life Quality Index (DLQI) is a ten-question questionnaire used to measure the impact of skin disease on the qual'
dsAttr273:
type: string
description: 'The Nail Psoriasis Severity Index (NAPSI) is a numeric, reproducible, objective, simple tool for evaluation of nail psoriasis.'
dsAttr274:
type: string
description: 'health assessment questionnaire–disability index'
dsAttr275:
type: string
description: 'Anti-Smith Antibody Positivity'
dsAttr276:
type: string
description: ' SSA (Ro) or SSB (La) antibodies is consistent with connective tissue disease, including Sjogren syndrome, lupus erythematosus'
dsAttr277:
type: string
description: 'For ITP'
dsAttr278:
type: string
description: 'For ITP'
dsAttr279:
type: string
description: 'AECA: anti-endothelial cell antibodies'
dsAttr280:
type: string
description: 'Checklist Individual Strength'
dsAttr281:
type: string
description: 'Checklist Individual Strength'
dsAttr282:
type: string
description: 'Checklist Individual Strength'
dsAttr283:
type: string
description: 'Checklist Individual Strength'
dsAttr284:
type: string
description: 'IgG index'
dsAttr285:
type: string
description: 'aspartate aminotransferase–to-platelet ratio index'
dsAttr286:
type: string
description: 'FIB-4, fibrosis index'
dsAttr287:
type: string
description: 'water channel protein aquaporin-4 (AQP4)'
dsAttr288:
type: string
description: 'Ranson score for patients with Acute Pancreatitis'
dsAttr289:
type: string
description: 'Balthazar score (for acute pancreatitis)'
dsAttr290:
type: string
description: 'MCTSI Modified Computed Tomography Severity Index'
dsAttr291:
type: string
description: 'bedside index of severity in acute pancreatitis'
dsAttr292:
type: string
description: 'Glasgow severity score'
dsAttr293:
type: string
description: 'degree of disability/dependence after a stroke'
dsAttr294:
type: string
description: 'International Autoimmune Hepatitis Group'
dsAttr295:
type: string
description: 'Bullous Pemphigoid Disease Area Index score'
dsAttr296:
type: string
description: 'BP180-NC16A'
dsAttr297:
type: string
description: 'BP230-CF'
dsAttr298:
type: string
description: 'BPDAI skin activity score'
dsAttr299:
type: string
description: 'Blisters/erosions score'
dsAttr300:
type: string
description: 'Erythema/urticaria score'
dsAttr301:
type: string
description: 'for Bullous pemphigoid'
dsAttr302:
type: string
description: 'ESSDAI EULAR Sjögren Disease Activity Index'
dsAttr303:
type: string
description: 'ESSPRI EULAR Sjögren Patient Reported Index'
dsAttr304:
type: string
description: 'MEDS, mortality in emergency department sepsis'
dsAttr305:
type: string
description: 'ASA, American Society of Anesthesiologists physical status'
dsAttr306:
type: string
description: 'MS(±): fulfilled/not fulfilled IDF (International Diabetes Foundation) criteria for metabolic syndrome'
dsAttr307:
type: string
description: 'SDAI Simple Disease Activity Index'
dsAttr308:
type: string
description: 'VAS-PAIN (0-100mm)'
dsAttr309:
type: string
description: 'For PsA'
dsAttr310:
type: string
description: 'BODE Index'
dsAttr311:
type: string
description: 'SPARCC Spondyloarthritis Research Consortium of Canada Enthesitis Index'
dsAttr312:
type: string
description: 'SJC swollen joint count'
dsAttr313:
type: string
description: 'FEV1/FVC'
dsAttr314:
type: string
description: 'eczema area and severity index'
dsAttr315:
type: string
description: 'investigator’s global assessment'
dsAttr316:
type: string
description: 'visual analogue scale'
dsAttr317:
type: string
description: 'Visual analogur score'
dsAttr318:
type: string
description: 'Forced Ventilatory Capacity (L)'
dsAttr319:
type: string
description: 'BBB impairment'
dsAttr322:
type: string
description: 'positive or negative group'
dsAttr323:
type: string
description: 'Mexican version of the Systemic Lupus Erythematosus Disease Activity Index'
dsAttr324:
type: string
description: 'Systemic Lupus International Collaborating Clinics'
dsAttr325:
type: string
description: 'anti-nuclear antibody'
dsAttr326:
type: string
description: 'Anti-Ro/SSA titre for SLE'
dsAttr327:
type: string
description: 'Anti-La/SSB antibodies'
dsAttr328:
type: string
description: 'anti-Smith antibodies'
dsAttr329:
type: string
description: 'maximal mid-expiratory flow'
dsAttr330:
type: string
description: 'Cytoplasmic anti-neutrophil cytoplasmic antibodies'
dsAttr331:
type: string
description: 'Perinuclear anti-neutrophil cytoplasmic antibodies'
dsAttr332:
type: string
description: 'Anticardiolipin antibody'
dsAttr333:
type: string
description: 'British Isles Lupus Assessment Group'
dsAttr334:
type: string
description: 'antinucleosome antibodies'
dsAttr335:
type: string
description: 'anti-U1 small nuclear ribonucleoprotein'
dsAttr336:
type: string
description: 'antinuclear ribonucleoprotein'
dsAttr337:
type: string
description: 'anti-Sjögren’s syndromerelated (SS) antigen A'
dsAttr338:
type: string
description: 'anti-Sjögren’s syndromerelated (SS) antigen B'
dsAttr339:
type: string
description: 'The 5-item Asthma Control Questionnaire'
dsAttr340:
type: string
description: 'a patient-reported measure of asthma-specific health-related quality of life'
dsAttr341:
type: string
description: 'AM asthma symptom score'
dsAttr342:
type: string
description: 'PM asthma symptom score'
dsAttr343:
type: string
description: 'Charlson Index'
dsAttr344:
type: string
description: 'Elixhauser Index'
dsAttr345:
type: string
description: 'FEV1 reversibility'
dsAttr346:
type: string
description: 'Asthma Control Questionnaire'
dsAttr347:
type: string
description: 'For asthma'
dsAttr348:
type: string
description: 'For asthma'
dsAttr349:
type: string
description: 'ACQ, asthma control questionnaire'
dsAttr350:
type: string
description: 'HADSâ€D: depressive symptoms of the Hospital Anxiety and Depression Scale;'
dsAttr351:
type: string
description: 'HADSâ€A: anxiety symptoms of the Hospital Anxiety and Depression Scale'
dsAttr352:
type: string
description: 'Modified Borg Scale scores'
dsAttr353:
type: string
description: 'for text data'
dsAttr354:
type: string
description: 'FEF: Forced expiratory flow'
dsAttr355:
type: string
description: 'FEF: Forced expiratory flow'
dsAttr356:
type: string
description: 'The National Institutes of Health Stroke Scale'
dsAttr357:
type: string
description: 'Hamilton Depression Rating Scale'
dsAttr358:
type: string
description: 'Hamilton Anxiety Rating Scale'
dsAttr360:
type: string
description: 'modified British Medical Research Council'
dsAttr361:
type: string
description: 'CAT (COPD assessment test) score'
dsAttr362:
type: string
description: 'Acute Physiology and Chronic Health Evaluation'
dsAttr363:
type: string
description: 'simplified acute physiology score'
dsAttr364:
type: string
description: 'Response Evaluation Criteria in Solid Tumors'
dsAttr365:
type: string
description: 'For Chronic hepatitis C'
dsAttr366:
type: string
description: 'STAI: State-Trait Anxiety Inventory'
dsAttr367:
type: string
description: 'STAI: State-Trait Anxiety Inventory'
dsAttr368:
type: string
description: 'Diabetes Quality of Life'
dsAttr369:
type: string
description: 'For rhinitis'
dsAttr370:
type: string
description: 'Dietary Approaches to Stop Hypertension (range: 0–9, with higher scores indicating better DASH concordance);'
dsAttr371:
type: string
description: 'for asthma'
dsAttr372:
type: string
description: 'RAI (Ritchie’s articular index)'
dsAttr373:
type: string
description: 'SF-MPQ (simplified McGill pain questionnaire)'
dsAttr374:
type: string
description: 'six-point composite disease activity index using erythrocyte sedimentation rate (ESR)'
dsAttr375:
type: string
description: 'six-point composite disease activity index using Creactive protein (CRP)'
dsAttr376:
type: string
description: 'TJC, tender joint count'
dsAttr377:
type: string
description: 'Epstein-Barr virus (EBV)'
dsAttr378:
type: string
description: '0-Dead, 100-Normal'
dsAttr379:
type: string
description: 'disease activity index'
dsAttr380:
type: string
description: 'disease severity scale for systemic sclerosis'
dsAttr381:
type: string
description: 'Juvenile Arthritis Disease Activity Score'
dsAttr382:
type: string
description: 'JSpaDA score'
dsAttr383:
type: string
description: 'sJADAS10score'
dsAttr384:
type: string
description: 'State Trait Anxiety Inventory'
dsAttr385:
type: string
description: 'Active joint count'
dsAttr386:
type: string
description: 'Limited joint count'
dsAttr387:
type: string
description: 'Depressive symptoms (MFQ-C)'
dsAttr388:
type: string
description: 'Juvenile Arthritis Disease Activity Score'
dsAttr389:
type: string
description: 'Childhood Health Assessment Questionnaire'
dsAttr390:
type: string
description: 'Physician global assessment VAS (0–10 cm)'
dsAttr391:
type: string
description: 'Patient general VAS'
dsAttr392:
type: string
description: 'CHAQ disability index'
dsAttr393:
type: string
description: 'CHAQ pain visual analogue score'
dsAttr394:
type: string
description: 'myositis specific autoantibody'
dsAttr395:
type: string
description: 'Modified Systemic Manifestation Score'
dsAttr396:
type: string
description: 'physical function'
dsAttr397:
type: string
description: 'physicians assessment of activity'
dsAttr398:
type: string
description: 'health-related quality of life'
dsAttr399:
type: string
description: 'patients well-being'
dsAttr400:
type: string
description: '71-joint count Juvenile Arthritis Disease Activity Score'
dsAttr401:
type: string
description: 'health assessment questionnaire'
dsAttr402:
type: string
description: 'PGA-A, Physician global assessment of activity'
dsAttr403:
type: string
description: 'PGA-D, Physician Global Assessment of Damage'
dsAttr404:
type: string
description: 'mLoSSI, modified Localized Scleroderma Skin Score'
dsAttr405:
type: string
description: 'LoSDI, Localized Scleroderma Damage Index'
dsAttr406:
type: string
description: 'anti-ssDNA, anti-single stranded DNA antibodies'
dsAttr407:
type: string
description: 'AHA, anti-histone antibodies'
dsAttr408:
type: string
description: 'Patient-GA, patient Global Assessment of disease impact'
dsAttr409:
type: string
description: 'Parent-GA, parent Global Assessment of disease impact'
dsAttr410:
type: string
description: 'CMAS, Childhood Myositis Assessment Scale'
dsAttr411:
type: string
description: 'DAS total'
dsAttr412:
type: string
description: 'DAS muscle'
dsAttr413:
type: string
description: 'DAS skin'
dsAttr414:
type: string
description: 'MSA antibodies (Myositis-specific antibodies)'
dsAttr415:
type: string
description: 'Manual muscle testing of 8 muscle groups'
dsAttr416:
type: string
description: 'SMA motor score (HMFSE, 0-66) (Hammersmith Functional Motor Scale-Expanded)'
dsAttr417:
type: string
description: 'on tumor cells'
dsAttr418:
type: string
description: 'seropositivity for SARS-CoV-2 IgG antibodies'
dsAttr419:
type: string
description: 'viral load'
dsAttr420:
type: string
description: 'Anti-centromere antibodies in serum'
dsAttr421:
type: string
description: 'Anti-Scl-70 antibodies in serum'
dsAttr422:
type: string
description: 'viral load i CSF'
dsAttr423:
type: string
description: 'Anti-Ro52 antibodies seropositivity'
dsAttr424:
type: string
description: 'anti-Ribonucleoprotein'
dsAttr425:
type: string
description: 'Anti-Phospholipids i.e. for Lupus nephritis'
dsAttr426:
type: string
description: 'WHO Class i.e. for Lupus nephritis'
dsAttr427:
type: string
description: 'Non-renal SLEDAI i.e. for Lupus nephritis'
dsAttr428:
type: string
description: 'anti Acetylcholine receptor in sera'
dsAttr429:
type: string
description: 'AchR Acetylcholine receptor in sera titer'
dsAttr430:
type: string
description: 'Myasthenia Gravis Foundation of America'
dsAttr431:
type: string
description: 'for Myastenia gravis'
dsAttr432:
type: string
description: 'high-avidity antinuclear antibody (ANA) of the IgG isotype'
dsAttr433:
type: string
description: 'Autoimmune Bullous Skin Disorder Intensity Score'
dsAttr434:
type: string
description: 'Anti-Desmoglein1 antibody'
dsAttr435:
type: string
description: 'anti-Desmoglein3 AB'
dsAttr436:
type: string
description: 'FSS: Fatigue Severity Scale'
dsAttr437:
type: string
description: 'SpO2: oxygen saturation'
dsAttr438:
type: string
description: 'HLA-B51 positivity'
dsAttr439:
type: string
description: 'Myasthenia Gravis Activities of Daily Living'
dsAttr440:
type: string
description: 'For MDS'
dsAttr441:
type: string
description: 'WPSS: WHO classification-based Prognostic Scoring System'
dsAttr442:
type: string
description: 'the total amount of iron in your blood plus the UIBC (Unsaturated iron-binding capacity)'
dsAttr443:
type: string
description: 'TSAT = transferrin saturation'
dsAttr444:
type: string
description: 'IPSS-R (Revised International Prognostic Scoring System)'
dsAttr445:
type: string
description: 'IPSS (International Prognostic Scoring System)'
dsAttr446:
type: string
description: 'Unsaturated Iron Binding Capacity'
dsAttr447:
type: string
description: 'Homeostasis model assessment of insulin resistance'
dsAttr448:
type: string
description: 'Homeostasis model assessment of insulin resistance'
dsAttr449:
type: string
description: 'Homeostasis model assessment of insulin resistance'
dsAttr450:
type: string
description: 'key features of acromegaly: signs and symptoms (S), associated comorbidities (A), GH levels (G), IGF-1 levels (I), and the Tumor'
dsAttr451:
type: string
description: 'Lung RV in liters'
dsAttr452:
type: string
description: 'Lung residual volume (%)'
dsAttr453:
type: string
description: ' The five-point Fleischner grading system offers the possibility to more precisely grade the visual severity of parenchymal emph'
xml:
name: query_data
securitySchemes:
cytocon_auth:
type: oauth2
flows:
implicit:
authorizationUrl: https://cytocon.insysbio.com/oauth/token
scopes:
read:diseases: read diseases
read:tissues_types: read tissue types
read:species: read species
read:markers: read markers
read:patient_group_attributes: read patient group attributes
read:disease_attributes: read disease attributes
read:query_data: read query data
read:query_data_headers: read query headers data
api_key:
type: apiKey
name: Authorization
in: header