CYTOCON API

This API allows access to CYTOCON DB (Cell and cYTOkineCONcentrations DataBase), a manually curated online database containing baseline of cells and cytokines concentrations in different tissues of both healthy individuals and patients suffering from various pathologies. Important! In order to make a query, all parameters must be chosen from the database dictionaries.
More information: https://openapi-generator.tech
Contact Info: support@insysbio.com
Version: 1.0.0
BasePath:/api/v1
Apache 2.0
http://www.apache.org/licenses/LICENSE-2.0.html

Access

  1. OAuth AuthorizationUrl:https://cytocon.insysbio.com/oauth/tokenTokenUrl:
  2. APIKey KeyParamName:Authorization KeyInQuery:false KeyInHeader:true

Methods

[ Jump to Models ]

Table of Contents

DiseaseAttributes

Diseases

Markers

PatientGroupAttributes

QueryData

QueryDataHeaders

Species

TissuesTypes

DiseaseAttributes

Up 
get /disease_attributes
Return list of Disease attributes. Required for query result output. The results of queries may include disease-specific clinical measures, e.g. Forced Expiratory Volume (FEV1) for Asthma; SLEDAI 2K range, interferon signature for Systemic Lupus Erythematosus (SLE); SCORAD range, severity, IgE concentration range for Atopic Dermatitis. (diseaseAttributesGet)

Return type

array[DiseaseAttribute]

Example data

Content-Type: application/json
[ {
  "name" : "Cancer stage (I-IV)",
  "id" : 10
}, {
  "name" : "Cancer stage (I-IV)",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

Diseases

Up 
get /diseases
Return full list of the diseases to be used in Query (optional parameter for query). (diseasesGet)

Return type

array[Disease]

Example data

Content-Type: application/json
[ {
  "name" : "Asthma",
  "id" : 10
}, {
  "name" : "Asthma",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

Markers

Up 
get /markers
Return list of Markers to be used in Query (optional parameter for query). Users can refine searches for cell concentrations by specifying cell markers (e.g. CD4+ and IL4+ for T-helper type 2 cells). (markersGet)

Return type

array[Marker]

Example data

Content-Type: application/json
[ {
  "name" : "CD4+",
  "id" : 10
}, {
  "name" : "CD4+",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

PatientGroupAttributes

Up 
get /patient_group_attributes
Return list of patient group attributes. Required for query result output. The results of queries may include demographic information such as age, race, gender, and other details, such as the number of patients in the study, if the source provides such information. (patientGroupAttributesGet)

Return type

array[PatientGroupAttribute]

Example data

Content-Type: application/json
[ {
  "name" : "Patient number",
  "id" : 10
}, {
  "name" : "Patient number",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

QueryData

Up 
get /query_data
Return list with query output according to parameters provided. There are a total of four parameters, where "Species" is mandatory, and "Tissue types", "Diseases", and "Cell markers" are optional. Multiple inputs can be selected for all parameters, but currently, only the "OR" logic is supported. (queryDataGet)

Query parameters

species (required)
Query Parameter — list of species names separated by "," choosed species list. "OR" logical operator default: null
tissue_types (optional)
Query Parameter — list of tissues names separated by "," choosed tissue_types list. "OR" logical operator default: null
diseases (optional)
Query Parameter — list of diseases names separated by "," choosed query list. "OR" logical operator default: null
markers (optional)
Query Parameter — list of markers names separated by "," choosed markers list. "OR" logical operator default: null
wstatSwitch (optional)
Query Parameter — true - only weighted result or false - all data without weighted result default: null
headers (optional)
Query Parameter — comma separated list of params to output to result default: null

Return type

array[QueryData]

Example data

Content-Type: application/json
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  "dsAttr304" : 5.296102445648278,
  "dsAttr425" : "dsAttr425",
  "dsAttr20" : 1.1730742509559433,
  "dsAttr305" : "dsAttr305",
  "dsAttr426" : "dsAttr426",
  "dsAttr21" : 4.965218492984954,
  "dsAttr306" : "dsAttr306",
  "dsAttr427" : "dsAttr427",
  "dsAttr307" : 3.8156682252305574,
  "dsAttr428" : "dsAttr428",
  "dsAttr308" : 1.9626702727164813,
  "dsAttr429" : 1.6056289151258096,
  "dsAttr309" : 5.573385265048522,
  "dsAttr410" : 0.29551818216563164,
  "dsAttr411" : 0.7370530802760489,
  "dsAttr412" : 4.318826475758856,
  "dsAttr413" : 9.908114046741538,
  "dsAttr414" : "dsAttr414",
  "dsAttr415" : 7.541803065493349,
  "dsAttr416" : 7.437703257022269,
  "dsAttr417" : "dsAttr417",
  "dsAttr418" : "dsAttr418",
  "dsAttr419" : 8.875589915795528,
  "s_val_org" : 67.2,
  "dsAttr400" : 0.6895265584691002,
  "dsAttr401" : 9.290244967928562,
  "dsAttr402" : 3.5366534267201475,
  "dsAttr403" : 5.267310321293582,
  "dsAttr404" : 8.331741856019029,
  "dsAttr405" : 7.6528347060559,
  "dsAttr406" : "dsAttr406",
  "dsAttr407" : "dsAttr407",
  "dsAttr408" : 9.120398275527268,
  "dsAttr409" : 8.223593720381889,
  "pg_desc" : "All patients suffered from an acute exacerbation of their AD and were treated with pimecrolimus cream 1% twice daily for 3 weeks",
  "s_disp_max_org" : 12.5,
  "u_org" : "%__Lymphocytes_Blood_Atopic dermatitis",
  "source" : "Article",
  "dsAttr99" : "dsAttr99",
  "dsAttr88" : 5.533258397034986,
  "dsAttr89" : 3.2588565619047607,
  "dsAttr90" : "dsAttr90",
  "dsAttr97" : "dsAttr97",
  "dsAttr98" : "dsAttr98",
  "dsAttr95" : "dsAttr95",
  "dsAttr96" : 4.258773108174356,
  "dsAttr93" : "dsAttr93",
  "dsAttr94" : 6.628464275087742,
  "dsAttr91" : 4.078845849666752,
  "dsAttr92" : 0.2025324113236393,
  "disease" : "Atopic dermatitis",
  "dsAttr79" : "dsAttr79",
  "dsAttr77" : "dsAttr77",
  "dsAttr78" : "dsAttr78",
  "dsAttr86" : 3.0576100241049344,
  "dsAttr87" : 7.04836565559697,
  "dsAttr84" : 7.740351818741173,
  "dsAttr85" : 3.0205796992916243,
  "dsAttr82" : "dsAttr82",
  "dsAttr83" : "dsAttr83",
  "dsAttr80" : "dsAttr80",
  "dsAttr81" : "dsAttr81",
  "s_unf_val" : 1498528.0,
  "exp_m" : "FACS (Fluorescence-activated cell sorting)",
  "s_name" : "T-cells",
  "s_val_isf" : 111.1,
  "has_misprint" : "false",
  "s_disp_left" : 60208.0,
  "u_rcl_ass" : "Exact number calculated from % using averaged concentration of the maternal cell in the tissue and the disease from CYTOCON DB data",
  "pg_sg" : "false",
  "link" : "Table 2, p.949",
  "avg_t" : "Mean",
  "s_val" : 1498528.0,
  "s_disp_min" : 17.0
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

QueryDataHeaders

Up 
get /query_data_headers
Return list with query header output according to parameters provided. There one parameter, where "Diseases" is optional. Multiple inputs can be selected, but currently, only the "OR" logic is supported. (queryDataHeadersGet)

Query parameters

diseases (optional)
Query Parameter — list of diseases names separated by "," choosed query list. "OR" logical operator default: null

Return type

array[QueryDataHeader]

Example data

Content-Type: application/json
[ {
  "ColumnDesc" : "ColumnDesc",
  "ColumnVariable" : "ColumnVariable"
}, {
  "ColumnDesc" : "ColumnDesc",
  "ColumnVariable" : "ColumnVariable"
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

Species

Up 
get /species
Return list of Species (names for cells and molecules) to be used in Query (mandatory parameter for query). (speciesGet)

Return type

array[Species]

Example data

Content-Type: application/json
[ {
  "name" : "T-cells",
  "id" : 10
}, {
  "name" : "T-cells",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

TissuesTypes

Up 
get /tissues_types
Return list of tissue types (compartments where cells or molecules measured) to be used in Query (optional parameter for query). (tissuesTypesGet)

Return type

array[TissueType]

Example data

Content-Type: application/json
[ {
  "name" : "Lymph node",
  "id" : 10
}, {
  "name" : "Lymph node",
  "id" : 10
} ]

Produces

This API call produces the following media types according to the Accept request header; the media type will be conveyed by the Content-Type response header.

Responses

200

successful operation

400

Invalid status value. This response appears when the required object does not exist in the DB.

Models

[ Jump to Methods ]

Table of Contents

  1. Disease -
  2. DiseaseAttribute -
  3. Marker -
  4. PatientGroupAttribute -
  5. QueryData -
  6. QueryDataHeader -
  7. Species -
  8. TissueType -

Disease - Up

id
Long format: int64
name
String Disease name available

DiseaseAttribute - Up

id
Long format: int64
name
String Disease attribute name used

Marker - Up

id
Long format: int64
name
String Cells marker available

PatientGroupAttribute - Up

id
Long format: int64
name
String Patient group name used

QueryData - Up

s_name
String Species name (Cell or molecule names)
s_unf_val (optional)
Double Species value arithmetic mean (Concentration in unified form of avarage in database. Dimension in pM or k cell/L) format: double
s_disp_unf (optional)
Double Species standard deviation (Unified form of dispersion in database. Dimension in pM or k cell/L) format: double
markers (optional)
String Cell markers (List of markers associated with cells)
s_val
Double Species value (Concentration in unified units. Dimension in pM or k cell/L) format: double
s_val_isf (optional)
Double Species value in ISF (Concentration in unified units (pM or kcell/L) recalculated regarded interstitial fluid volume) format: double
s_disp_left (optional)
Double Species dispersion left (Left border in unified units. Dimension in pM or k cell/L) format: double
s_disp_right (optional)
Double Species dispersion right (Right border in unified units. Dimension in pM or k cell/L) format: double
s_disp_min (optional)
Double Species min value (Minimum value in unified units. Dimension in pM or k cell/L) format: double
s_disp_max (optional)
Double Species max value (Maximum value in unified units. Dimension in pM or k cell/L) format: double
s_val_org (optional)
Double Species value (original). Original value from source format: double
s_disp_left_org (optional)
Double Species dispersion left(original). Original value from source format: double
s_disp_right_org (optional)
Double Species dispersion right(original). Original value from source format: double
s_disp_min_org (optional)
Double Species min value(original). Original value from source format: double
s_disp_max_org (optional)
Double Species max value(original). Original value from source format: double
u_base
String Unified units (pM or kcell/L)
u_org (optional)
String Original unit (unit from source)
u_rcl_ass (optional)
String Recalculation assumptions. If we recalculate the original value (e.g. due to a misprint in the paper or when we need calculate exact number from % using external data), we explicitly explain how and why the recalculation was performed
tissue_t (optional)
String Tissue type
disease (optional)
String Disease
avg_t (optional)
String Average type
disp_t (optional)
String Dispersion type
exp_m (optional)
String Experimental method
id_type (optional)
String ID type (ID for original source (e.g. PMID))
id_val (optional)
String ID value
link (optional)
String Link to place in paper where value was found
source (optional)
String Source type (e.g paper, book, etc.)
pg_desc (optional)
String Patient group description
pg_sg (optional)
String Patient group is subgroup. If a value is extracted in addition to the overall value from a large cohort (e.g., the paper presents data for all patients, then divides it by males and females), we indicate this
has_misprint (optional)
String If we detect a misprint (e.g., incorrect dimensions), we indicate it
sv_desc (optional)
String Species values description (additional information that can be useful for users about this value)
pgAttr1 (optional)
String race/ethnicity or group of races of patients format: string
pgAttr2 (optional)
Integer number of males in patient group format: int32
pgAttr3 (optional)
Integer number of females in patient group format: int32
pgAttr4 (optional)
Double Average age of the patient group format: double
pgAttr10 (optional)
String any other attributes of patient group format: string
pgAttr11 (optional)
Integer Patient number in the group format: int32
pgAttr15 (optional)
Double Patient weight in kg format: double
pgAttr16 (optional)
Double Patient BMI (body mass index) in kg/m2 format: double
pgAttr17 (optional)
Double Patient group average height format: double
pgAttr18 (optional)
String Patient Smoking status format: string
pgAttr21 (optional)
Double Fasting before blood draw (hours) format: double
pgAttr22 (optional)
String Exclusion criteria for patient group format: string
pgAttr23 (optional)
String Inclusion criteria for patients format: string
pgAttr24 (optional)
String Information about treatment format: string
pgAttr25 (optional)
String additional diagnoses format: string
pgAttr26 (optional)
Integer Samples number of the patient group format: int32
pgAttr27 (optional)
String Patient drinking history format: string
pgAttr28 (optional)
String Alcohol history format: string
pgAttr29 (optional)
Double Waist-Hip Ratio (WHR) format: double
pgAttr30 (optional)
Double Erythrocyte sedimentation rate format: double
pgAttr31 (optional)
String blood groups format: string
pgAttr32 (optional)
Double Waist circumference i.e. for patients with diabet format: double
dsAttr1 (optional)
Double SCORing Atopic Dermatitis format: double
dsAttr4 (optional)
String Severity of the disease format: string
dsAttr7 (optional)
String Atopic dermatitis type format: string
dsAttr8 (optional)
String Atopic dermatitis phase format: string
dsAttr14 (optional)
Double Forced expiratory volume in 1 second, spirometry characteristic format: double
dsAttr15 (optional)
String Global initiative for chronic Obstructive Lung Disease (GOLD) criteria format: string
dsAttr16 (optional)
String High/Low level of IFN1 gene expression format: string
dsAttr17 (optional)
Double SLEDAI 2K score format: double
dsAttr18 (optional)
Double Glucocorticosteroids dose format: double
dsAttr19 (optional)
Double Glucocorticosteroids dose format: double
dsAttr20 (optional)
Double Immunoglobulin E specific concentration format: double
dsAttr21 (optional)
Double Immunoglobulin E total concentration format: double
dsAttr25 (optional)
String Active/inactive stage of the disease format: string
dsAttr26 (optional)
String Cancer stage (I-IV) format: string
dsAttr27 (optional)
String T stage of cancer (TNM) format: string
dsAttr28 (optional)
String N stage of cancer (TNM) format: string
dsAttr29 (optional)
String M stage of cancer (TNM) format: string
dsAttr30 (optional)
Double peak expiratory flow format: double
dsAttr31 (optional)
Double fraction of exhaled NO format: double
dsAttr33 (optional)
Integer Number of patients using prescribed ICS regularly and properly format: int32
dsAttr34 (optional)
Double Daily dose of ICS format: double
dsAttr35 (optional)
Double airway resistance format: double
dsAttr36 (optional)
Integer Crohn’s Disease Activity Index (CDAI) format: int32
dsAttr37 (optional)
Double Disease duration format: double
dsAttr55 (optional)
Double objective SCORAD format: double
dsAttr56 (optional)
Double TEWL g/m2/h format: double
dsAttr57 (optional)
Double Pruritus score format: double
dsAttr58 (optional)
Double Sleep loss format: double
dsAttr59 (optional)
Double Extent (%) - affected Body Surface Area (BSA) format: double
dsAttr60 (optional)
Double CDLQI - Children’s Dermatology Life Quality Index format: double
dsAttr61 (optional)
Double SH (Skin Hydration) measured on Corneometer CM 825 format: double
dsAttr62 (optional)
Double FEV1 % of the patient divided by the average FEV1% in the population for any person of similar age, sex, and body composition format: double
dsAttr63 (optional)
Double % reversibility of asthma format: double
dsAttr64 (optional)
Double Provocation concentration (PC) that results in a 20% fall in the forced expiratory volume in 1 second (FEV1) format: double
dsAttr65 (optional)
Double The provocative dose of methacholine causing a ≥20% fall in FEV1 (PD20) format: double
dsAttr66 (optional)
Double Wheal diameter induced by allergen (mm) format: double
dsAttr67 (optional)
String Status asthmaticus existence format: string
dsAttr68 (optional)
Double FEV1 before salbutamol (% predicted) format: double
dsAttr69 (optional)
Double FEV1 after salbutamol (% predicted) format: double
dsAttr70 (optional)
String Astma severity score format: string
dsAttr71 (optional)
Double for PMID 24800011 format: double
dsAttr72 (optional)
Double Psoriasis Area Severity Index format: double
dsAttr73 (optional)
Double System developed and validated by the EULAR to measure the progress and improvement of Rheumatoid Arthritis format: double
dsAttr74 (optional)
String Severity score for acute allergic reactions format: string
dsAttr75 (optional)
String Cancer stage for mixed groups format: string
dsAttr76 (optional)
String Tumor histological grade format: string
dsAttr77 (optional)
String Sarcoidosis stages (chest radiograph stages (Scadding criteria)) format: string
dsAttr78 (optional)
String Performance status (Eastern Cooperative Oncology Group) format: string
dsAttr79 (optional)
String Harvey–Bradshaw Index format: string
dsAttr80 (optional)
String Endoscopic activity score (Rutgeerts) format: string
dsAttr81 (optional)
String Clinical activity index (Mayo) format: string
dsAttr82 (optional)
String Endoscopic activity score (Mayo) format: string
dsAttr83 (optional)
String Clark's level is a staging system, which describes the level of anatomical invasion of the melanoma in the skin format: string
dsAttr84 (optional)
Double Systemic Lupus Erythematosus Disease Activity Index format: double
dsAttr85 (optional)
Double Systemic Lupus International Collaborating Clinics/ACR Damage Index; SDI format: double
dsAttr86 (optional)
Double Anti-dsDNA: anti-double-stranded DNA format: double
dsAttr87 (optional)
Double Mini Mental State Examination (MMSE) score format: double
dsAttr88 (optional)
Double SLE disease activity score [ECLAM] format: double
dsAttr89 (optional)
Double APOE E4 carrier or non-carrier (% of patients)) format: double
dsAttr90 (optional)
String ISN/RPS (International Society of Nephrology/Renal Pathology Society) class format: string
dsAttr91 (optional)
Double chronicity index (CI) format: double
dsAttr92 (optional)
Double Expanded Disability Status score format: double
dsAttr93 (optional)
String W.H.O. grade of cancer format: string
dsAttr94 (optional)
Double Systemic Lupus Activity Measure (SLAM) format: double
dsAttr95 (optional)
String compensated and decompensated phases format: string
dsAttr96 (optional)
Double Histological activity index for hepatitis format: double
dsAttr97 (optional)
String Period of infection disease format: string
dsAttr98 (optional)
String Fibrosis stage for hepatitis B format: string
dsAttr99 (optional)
String Inflammation grade for chronic hepatitis B format: string
dsAttr100 (optional)
Double for chronic hepatitis B format: double
dsAttr101 (optional)
Double for chronic hepatitis B format: double
dsAttr102 (optional)
Double Anti-dsDNA/reference anti-dsDNA ratio format: double
dsAttr103 (optional)
Double Necroinflammation grading for CHB format: double
dsAttr104 (optional)
String Hepatitis B e antigen seropositivity format: string
dsAttr105 (optional)
String hepatitis B core antigen Expression Patterns in Hepatocyte format: string
dsAttr106 (optional)
String HBsAg Expression Patterns in Hepatocyte format: string
dsAttr107 (optional)
Double For hepatitis format: double
dsAttr108 (optional)
String HBsAg seropositivity format: string
dsAttr109 (optional)
String Glomerulonephritis class I-V format: string
dsAttr110 (optional)
Double For Lupus nephritis was added format: double
dsAttr111 (optional)
String For IgA nephropathy format: string
dsAttr112 (optional)
String parenchymal liver disease (PLD) score format: string
dsAttr113 (optional)
String a system for assessing the prognosis of chronic liver disease, primarily cirrhosis format: string
dsAttr114 (optional)
Double Clinical dementia rating (CDR) format: double
dsAttr115 (optional)
String Activity of inflammation for chronic hepatitis B format: string
dsAttr116 (optional)
String Hepatitis C Virus genotype format: string
dsAttr117 (optional)
String Hepatitis B Virus genotype format: string
dsAttr118 (optional)
String International Federation of Gynecology and Obstetrics clinical stage for uteric cervical cancer format: string
dsAttr119 (optional)
String Tumor differentiation status format: string
dsAttr120 (optional)
String Lymph node metastasis existence format: string
dsAttr121 (optional)
String For Uterine cervical cancer format: string
dsAttr122 (optional)
String Cancer vasoinvasion existence format: string
dsAttr124 (optional)
String Human papillomavirus positive/negative format: string
dsAttr125 (optional)
String Larsen grade value format: string
dsAttr126 (optional)
String anti-CCP antibody in plasma format: string
dsAttr127 (optional)
String Anti-HBe antigen in serum for chronic hepatitis B format: string
dsAttr128 (optional)
String for chronic hepatitis C, HCV-DNA in blood format: string
dsAttr129 (optional)
Double for Rheumatoid arthritis format: double
dsAttr130 (optional)
String Kellgren-Lawrence grading scale format: string
dsAttr131 (optional)
String for Rheumatoid arthritis according to DAS28 format: string
dsAttr132 (optional)
String Rheumatoid factor (RF) seropositivity format: string
dsAttr133 (optional)
Double for Rheumatoid arthritis format: double
dsAttr134 (optional)
Double Percent of Non-survivors (i.e. for COVID-19) format: double
dsAttr135 (optional)
Double For Ulderative colitis according to Lichtiger format: double
dsAttr136 (optional)
String Marburg cancer stage or SCLC format: string
dsAttr137 (optional)
String For Crohn's disease format: string
dsAttr138 (optional)
Double Crohn’s Disease Endoscopic Index of Severity (CDEIS) format: double
dsAttr139 (optional)
String Oral lichen planus type format: string
dsAttr140 (optional)
String Tumor histology type format: string
dsAttr141 (optional)
String Her2 expression i.e. for breast cancer format: string
dsAttr142 (optional)
String Lymphovascular space invasion existence i.e. for Cervical cancer format: string
dsAttr143 (optional)
String for colorectal cancer format: string
dsAttr144 (optional)
String Progesteron receptor expression on tumor cells (for breast cancer) format: string
dsAttr145 (optional)
String Estrogen receptor status for breast cancer format: string
dsAttr146 (optional)
String Simple Endoscopy Severity format: string
dsAttr147 (optional)
String Global Initiative for Asthma (GINA) format: string
dsAttr148 (optional)
Double recommended by GINA format: double
dsAttr149 (optional)
String the tendency to produce an exaggerated IgE immune response to otherwise harmless substances in the environment format: string
dsAttr150 (optional)
Double Harvey-Bradshaw Index format: double
dsAttr151 (optional)
String Endoscopic severity (Mayo) format: string
dsAttr152 (optional)
Double Positive and Negative Syndrome Scale (PANSS) for schizophrenia format: double
dsAttr153 (optional)
Double severity of depressive symptoms format: double
dsAttr154 (optional)
Double Acute Physiology and Chronic Health Evaluation format: double
dsAttr155 (optional)
String for HCC format: string
dsAttr156 (optional)
String Distant metastasis existence, i.e. extrahepatic metastasis for HCC format: string
dsAttr157 (optional)
String for arthritis format: string
dsAttr158 (optional)
String Antinuclear antibody (ANA)-seropositivity i.e. for arthritis format: string
dsAttr159 (optional)
String HLA-B27 seropositivity i.e. for arthritis format: string
dsAttr160 (optional)
String American Society of Reproductive Medicine (ASRM) classification of endometriosis format: string
dsAttr161 (optional)
String Phase of the menstrual cycle format: string
dsAttr162 (optional)
String For prostate cancer format: string
dsAttr163 (optional)
Double The Behcet’s Disease Current Activity Form (BDCAF) transformed index format: double
dsAttr164 (optional)
Double PSI, pneumonia severity index format: double
dsAttr165 (optional)
Double SOFA, Sepsis-related organ failure assessment score format: double
dsAttr166 (optional)
Double SAPS, simplified acute physiology score format: double
dsAttr167 (optional)
String For Lymphoma format: string
dsAttr168 (optional)
String For Lymphoma format: string
dsAttr169 (optional)
String For Lymphoma format: string
dsAttr170 (optional)
Double PCDAI = pediatric Crohn's disease activity index format: double
dsAttr171 (optional)
Double PUCAI = pediatric ulcerative colitis activity index format: double
dsAttr172 (optional)
String For Hodgkin's Lymphoma format: string
dsAttr173 (optional)
String For Lymphoma format: string
dsAttr174 (optional)
String For Lymphoma format: string
dsAttr175 (optional)
String Clinical outcome of the disease format: string
dsAttr176 (optional)
Double For diabets, glycated hemoglobin format: double
dsAttr177 (optional)
Double for COVID-19 format: double
dsAttr178 (optional)
Double for IBD format: double
dsAttr179 (optional)
String For UC format: string
dsAttr180 (optional)
Double for UC format: double
dsAttr181 (optional)
Double Simple endoscopic score for CD format: double
dsAttr182 (optional)
Double For CD format: double
dsAttr183 (optional)
String for NSCLC format: string
dsAttr184 (optional)
Double for disease severity PMID32979941,p.e3 format: double
dsAttr185 (optional)
Double Tumor size (cm) format: double
dsAttr186 (optional)
String Tumor Infiltrating Lymphocytes PD-L1 expression (for breast cancer) format: string
dsAttr187 (optional)
String Tumor cell PD-L1 expression (for breast cancer) format: string
dsAttr188 (optional)
String For AML, French-American-British (FAB) classification system is based on morphology to define specific immunotypes format: string
dsAttr189 (optional)
String St Gallen 2015 International Expert Consensus for Breast cancer format: string
dsAttr190 (optional)
Double DASO (Days after symptom onset) format: double
dsAttr191 (optional)
Double for COVID-19 format: double
dsAttr192 (optional)
Double Breslow thickness is the measurement of the depth of the melanoma from the surface of your skin down through to the deepest poin format: double
dsAttr193 (optional)
Double for COVID-19 format: double
dsAttr194 (optional)
Double for MDS format: double
dsAttr195 (optional)
Double Hamilton depression rating scale, without suicide ideation item format: double
dsAttr196 (optional)
Double Buss Perry aggression questionnaire format: double
dsAttr197 (optional)
Double for COVID-19 format: double
dsAttr198 (optional)
Double qSOFA, quick Sequential Organ Failure Assessment format: double
dsAttr199 (optional)
Double CMI, Charlson Comorbidity Index format: double
dsAttr200 (optional)
String anti-HBs seropositivity format: string
dsAttr201 (optional)
Double Model for end-stage liver disease (MELD) scores format: double
dsAttr202 (optional)
String HBc-antibody seropositivity format: string
dsAttr203 (optional)
String for COVID-19 format: string
dsAttr204 (optional)
String for Multiple sclerosis and others format: string
dsAttr205 (optional)
String for Multiple sclerosis format: string
dsAttr206 (optional)
Double Aneurysmal diameter format: double
dsAttr207 (optional)
Double for aneurysma format: double
dsAttr208 (optional)
Double for strokes format: double
dsAttr209 (optional)
Double a cumulative and weighted index used to assess disease activity across 24 different disease descriptors in patients with SLE format: double
dsAttr210 (optional)
Double measures the overall response to treatment as assessed by the physician format: double
dsAttr211 (optional)
Double for COVID-19 format: double
dsAttr212 (optional)
String for Multiple myeloma format: string
dsAttr213 (optional)
String for Multiple myeloma format: string
dsAttr214 (optional)
String ECOG Eastern Cooperative Oncology Group format: string
dsAttr215 (optional)
Double alpha smooth muscle actin - for Pancreatic cancer format: double
dsAttr216 (optional)
Double For Pancreatic cancer format: double
dsAttr217 (optional)
String HCV-Ab seropositivity format: string
dsAttr218 (optional)
String for HCC format: string
dsAttr219 (optional)
String BCLC stage, the Barcelona Clinic Liver Cancer stage format: string
dsAttr220 (optional)
Double a method for assessing β-cell function and insulin resistance (IR) from basal (fasting) glucose and insulin or C-peptide concent format: double
dsAttr221 (optional)
String for HCC format: string
dsAttr222 (optional)
String bleeding scale format: string
dsAttr223 (optional)
String for HCC format: string
dsAttr224 (optional)
Double estimating the risk of short-term mortality from actual clinical data in the first day after admission format: double
dsAttr225 (optional)
String Bone Lesion Score format: string
dsAttr226 (optional)
String (positive/negative) format: string
dsAttr227 (optional)
String for Gastric cancer format: string
dsAttr228 (optional)
String for Crohn Disease format: string
dsAttr229 (optional)
String for Crohn disease format: string
dsAttr230 (optional)
String for Crohn Disease format: string
dsAttr231 (optional)
String Stage 1: Infection ; Stage 2: Asymptomatic ; Stage 3: Symptomatic ; Stage 4: AIDS/Progression of HIV to AIDS. format: string
dsAttr232 (optional)
Double Forced Ventilatory Capacity format: double
dsAttr233 (optional)
Double Total Lung Capacity format: double
dsAttr234 (optional)
Double Diffusion capacity of the Lung for Carbon monoxide corrected for hemoglobin level format: double
dsAttr235 (optional)
Double Disease Activity Score 28 joints combined with CRP value format: double
dsAttr236 (optional)
Double for Multiple sclerosis - an MS relapse, flare-up, or exacerbation format: double
dsAttr237 (optional)
String for coeliac disease format: string
dsAttr238 (optional)
String for Coeliac disease format: string
dsAttr239 (optional)
String Kirsten rat sarcoma viral oncogene homologue (KRAS) is the best-known oncogene format: string
dsAttr240 (optional)
String EGFR mutation format: string
dsAttr241 (optional)
String Tumor location format: string
dsAttr242 (optional)
String Marsh Classification of histologic findings in celiac disease (Oberhuber) format: string
dsAttr243 (optional)
Double For RA and PsA format: double
dsAttr244 (optional)
Double For RA and PsA format: double
dsAttr245 (optional)
Double Larsen score for RA (0–4) format: double
dsAttr246 (optional)
Double Radiological score of sacroileitis for PsA (0–4) format: double
dsAttr247 (optional)
Double BASDAI Bath Ankylosing Spondylitis Disease Activity Index format: double
dsAttr248 (optional)
Double MASES Maastricht Ankylosing Spondylitis Enthesitis Score format: double
dsAttr249 (optional)
String For COPD format: string
dsAttr250 (optional)
Double MSSS (multiple sclerosis severity score) format: double
dsAttr251 (optional)
Double TJC68 format: double
dsAttr252 (optional)
Double SJC66 format: double
dsAttr253 (optional)
Double MRss, modified Rodnan skin score format: double
dsAttr254 (optional)
String the sum of the size of the largest tumor in cm and the total number of tumors in the absence of tumor microvascular invasion. format: string
dsAttr255 (optional)
String the small number of cancer cells in the body after cancer treatment. An MRD positive test result means that disease was still de format: string
dsAttr256 (optional)
Double Multiple Sclerosis Impact Scale 29 format: double
dsAttr257 (optional)
Double Multiple Sclerosis Impact Scale 29, format: double
dsAttr258 (optional)
Double Symbol Digit Modalities Test format: double
dsAttr259 (optional)
String Ophthalmopathy format: string
dsAttr260 (optional)
String degree of goiter format: string
dsAttr261 (optional)
Double for Graves disease format: double
dsAttr262 (optional)
String I (0–1 point), II (2–3 points), and III (4–6 points) format: string
dsAttr263 (optional)
Double For arthritits format: double
dsAttr264 (optional)
Double for IgG4-related disease format: double
dsAttr265 (optional)
Double for IgG4-Related disease format: double
dsAttr266 (optional)
Double ELF score (enhanced liver fibrosis) format: double
dsAttr267 (optional)
Double Disease Activity Score-28 for Rheumatoid Arthritis with ESR format: double
dsAttr268 (optional)
Double Ankylosing Spondylitis Disease Activity Score format: double
dsAttr269 (optional)
Double BASFI functional index format: double
dsAttr270 (optional)
Double BASMI measurement index format: double
dsAttr271 (optional)
Double For RA - CDAI format: double
dsAttr272 (optional)
Double The Dermatology life Quality Index (DLQI) is a ten-question questionnaire used to measure the impact of skin disease on the qual format: double
dsAttr273 (optional)
Double The Nail Psoriasis Severity Index (NAPSI) is a numeric, reproducible, objective, simple tool for evaluation of nail psoriasis. format: double
dsAttr274 (optional)
Double health assessment questionnaire–disability index format: double
dsAttr275 (optional)
String Anti-Smith Antibody Positivity format: string
dsAttr276 (optional)
String SSA (Ro) or SSB (La) antibodies is consistent with connective tissue disease, including Sjogren syndrome, lupus erythematosus format: string
dsAttr277 (optional)
String For ITP format: string
dsAttr278 (optional)
String For ITP format: string
dsAttr279 (optional)
String AECA: anti-endothelial cell antibodies format: string
dsAttr280 (optional)
Double Checklist Individual Strength format: double
dsAttr281 (optional)
Double Checklist Individual Strength format: double
dsAttr282 (optional)
Double Checklist Individual Strength format: double
dsAttr283 (optional)
Double Checklist Individual Strength format: double
dsAttr284 (optional)
Double IgG index format: double
dsAttr285 (optional)
Double aspartate aminotransferase–to-platelet ratio index format: double
dsAttr286 (optional)
Double FIB-4, fibrosis index format: double
dsAttr287 (optional)
String water channel protein aquaporin-4 (AQP4) format: string
dsAttr288 (optional)
Double Ranson score for patients with Acute Pancreatitis format: double
dsAttr289 (optional)
Double Balthazar score (for acute pancreatitis) format: double
dsAttr290 (optional)
Double MCTSI Modified Computed Tomography Severity Index format: double
dsAttr291 (optional)
Double bedside index of severity in acute pancreatitis format: double
dsAttr292 (optional)
Double Glasgow severity score format: double
dsAttr293 (optional)
Double degree of disability/dependence after a stroke format: double
dsAttr294 (optional)
Double International Autoimmune Hepatitis Group format: double
dsAttr295 (optional)
Double Bullous Pemphigoid Disease Area Index score format: double
dsAttr296 (optional)
Double BP180-NC16A format: double
dsAttr297 (optional)
Double BP230-CF format: double
dsAttr298 (optional)
Double BPDAI skin activity score format: double
dsAttr299 (optional)
Double Blisters/erosions score format: double
dsAttr300 (optional)
Double Erythema/urticaria score format: double
dsAttr301 (optional)
Double for Bullous pemphigoid format: double
dsAttr302 (optional)
Double ESSDAI EULAR Sjögren Disease Activity Index format: double
dsAttr303 (optional)
Double ESSPRI EULAR Sjögren Patient Reported Index format: double
dsAttr304 (optional)
Double MEDS, mortality in emergency department sepsis format: double
dsAttr305 (optional)
String ASA, American Society of Anesthesiologists physical status format: string
dsAttr306 (optional)
String MS(±): fulfilled/not fulfilled IDF (International Diabetes Foundation) criteria for metabolic syndrome format: string
dsAttr307 (optional)
Double SDAI Simple Disease Activity Index format: double
dsAttr308 (optional)
Double VAS-PAIN (0-100mm) format: double
dsAttr309 (optional)
Double For PsA format: double
dsAttr310 (optional)
Double BODE Index format: double
dsAttr311 (optional)
Double SPARCC Spondyloarthritis Research Consortium of Canada Enthesitis Index format: double
dsAttr312 (optional)
Double SJC swollen joint count format: double
dsAttr313 (optional)
Double FEV1/FVC format: double
dsAttr314 (optional)
Double eczema area and severity index format: double
dsAttr315 (optional)
Double investigator’s global assessment format: double
dsAttr316 (optional)
Double visual analogue scale format: double
dsAttr317 (optional)
Double Visual analogur score format: double
dsAttr318 (optional)
Double Forced Ventilatory Capacity (L) format: double
dsAttr319 (optional)
Double BBB impairment format: double
dsAttr322 (optional)
String positive or negative group format: string
dsAttr323 (optional)
Double Mexican version of the Systemic Lupus Erythematosus Disease Activity Index format: double
dsAttr324 (optional)
Double Systemic Lupus International Collaborating Clinics format: double
dsAttr325 (optional)
Double anti-nuclear antibody format: double
dsAttr326 (optional)
Double Anti-Ro/SSA titre for SLE format: double
dsAttr327 (optional)
Double Anti-La/SSB antibodies format: double
dsAttr328 (optional)
Double anti-Smith antibodies format: double
dsAttr329 (optional)
Double maximal mid-expiratory flow format: double
dsAttr330 (optional)
Double Cytoplasmic anti-neutrophil cytoplasmic antibodies format: double
dsAttr331 (optional)
Double Perinuclear anti-neutrophil cytoplasmic antibodies format: double
dsAttr332 (optional)
Double Anticardiolipin antibody format: double
dsAttr333 (optional)
Double British Isles Lupus Assessment Group format: double
dsAttr334 (optional)
Double antinucleosome antibodies format: double
dsAttr335 (optional)
Double anti-U1 small nuclear ribonucleoprotein format: double
dsAttr336 (optional)
Double antinuclear ribonucleoprotein format: double
dsAttr337 (optional)
Double anti-Sjögren’s syndromerelated (SS) antigen A format: double
dsAttr338 (optional)
Double anti-Sjögren’s syndromerelated (SS) antigen B format: double
dsAttr339 (optional)
Double The 5-item Asthma Control Questionnaire format: double
dsAttr340 (optional)
Double a patient-reported measure of asthma-specific health-related quality of life format: double
dsAttr341 (optional)
Double AM asthma symptom score format: double
dsAttr342 (optional)
Double PM asthma symptom score format: double
dsAttr343 (optional)
Double Charlson Index format: double
dsAttr344 (optional)
Double Elixhauser Index format: double
dsAttr345 (optional)
Double FEV1 reversibility format: double
dsAttr346 (optional)
Double Asthma Control Questionnaire format: double
dsAttr347 (optional)
Double For asthma format: double
dsAttr348 (optional)
Double For asthma format: double
dsAttr349 (optional)
Double ACQ, asthma control questionnaire format: double
dsAttr350 (optional)
Double HADS‐D: depressive symptoms of the Hospital Anxiety and Depression Scale; format: double
dsAttr351 (optional)
Double HADS‐A: anxiety symptoms of the Hospital Anxiety and Depression Scale format: double
dsAttr352 (optional)
Double Modified Borg Scale scores format: double
dsAttr353 (optional)
String for text data format: string
dsAttr354 (optional)
Double FEF: Forced expiratory flow format: double
dsAttr355 (optional)
Double FEF: Forced expiratory flow format: double
dsAttr356 (optional)
Double The National Institutes of Health Stroke Scale format: double
dsAttr357 (optional)
Double Hamilton Depression Rating Scale format: double
dsAttr358 (optional)
Double Hamilton Anxiety Rating Scale format: double
dsAttr360 (optional)
Double modified British Medical Research Council format: double
dsAttr361 (optional)
Double CAT (COPD assessment test) score format: double
dsAttr362 (optional)
Double Acute Physiology and Chronic Health Evaluation format: double
dsAttr363 (optional)
Double simplified acute physiology score format: double
dsAttr364 (optional)
String Response Evaluation Criteria in Solid Tumors format: string
dsAttr365 (optional)
Double For Chronic hepatitis C format: double
dsAttr366 (optional)
Double STAI: State-Trait Anxiety Inventory format: double
dsAttr367 (optional)
Double STAI: State-Trait Anxiety Inventory format: double
dsAttr368 (optional)
Double Diabetes Quality of Life format: double
dsAttr369 (optional)
Double For rhinitis format: double
dsAttr370 (optional)
Double Dietary Approaches to Stop Hypertension (range: 0–9, with higher scores indicating better DASH concordance); format: double
dsAttr371 (optional)
Double for asthma format: double
dsAttr372 (optional)
Double RAI (Ritchie’s articular index) format: double
dsAttr373 (optional)
Double SF-MPQ (simplified McGill pain questionnaire) format: double
dsAttr374 (optional)
Double six-point composite disease activity index using erythrocyte sedimentation rate (ESR) format: double
dsAttr375 (optional)
Double six-point composite disease activity index using Creactive protein (CRP) format: double
dsAttr376 (optional)
Double TJC, tender joint count format: double
dsAttr377 (optional)
String Epstein-Barr virus (EBV) format: string
dsAttr378 (optional)
String 0-Dead, 100-Normal format: string
dsAttr379 (optional)
Double disease activity index format: double
dsAttr380 (optional)
Double disease severity scale for systemic sclerosis format: double
dsAttr381 (optional)
Double Juvenile Arthritis Disease Activity Score format: double
dsAttr382 (optional)
Double JSpaDA score format: double
dsAttr383 (optional)
Double sJADAS10score format: double
dsAttr384 (optional)
Double State Trait Anxiety Inventory format: double
dsAttr385 (optional)
Double Active joint count format: double
dsAttr386 (optional)
Double Limited joint count format: double
dsAttr387 (optional)
Double Depressive symptoms (MFQ-C) format: double
dsAttr388 (optional)
Double Juvenile Arthritis Disease Activity Score format: double
dsAttr389 (optional)
Double Childhood Health Assessment Questionnaire format: double
dsAttr390 (optional)
Double Physician global assessment VAS (0–10 cm) format: double
dsAttr391 (optional)
Double Patient general VAS format: double
dsAttr392 (optional)
Double CHAQ disability index format: double
dsAttr393 (optional)
Double CHAQ pain visual analogue score format: double
dsAttr394 (optional)
String myositis specific autoantibody format: string
dsAttr395 (optional)
Double Modified Systemic Manifestation Score format: double
dsAttr396 (optional)
Double physical function format: double
dsAttr397 (optional)
Double physicians assessment of activity format: double
dsAttr398 (optional)
Double health-related quality of life format: double
dsAttr399 (optional)
Double patients well-being format: double
dsAttr400 (optional)
Double 71-joint count Juvenile Arthritis Disease Activity Score format: double
dsAttr401 (optional)
Double health assessment questionnaire format: double
dsAttr402 (optional)
Double PGA-A, Physician global assessment of activity format: double
dsAttr403 (optional)
Double PGA-D, Physician Global Assessment of Damage format: double
dsAttr404 (optional)
Double mLoSSI, modified Localized Scleroderma Skin Score format: double
dsAttr405 (optional)
Double LoSDI, Localized Scleroderma Damage Index format: double
dsAttr406 (optional)
String anti-ssDNA, anti-single stranded DNA antibodies format: string
dsAttr407 (optional)
String AHA, anti-histone antibodies format: string
dsAttr408 (optional)
Double Patient-GA, patient Global Assessment of disease impact format: double
dsAttr409 (optional)
Double Parent-GA, parent Global Assessment of disease impact format: double
dsAttr410 (optional)
Double CMAS, Childhood Myositis Assessment Scale format: double
dsAttr411 (optional)
Double DAS total format: double
dsAttr412 (optional)
Double DAS muscle format: double
dsAttr413 (optional)
Double DAS skin format: double
dsAttr414 (optional)
String MSA antibodies (Myositis-specific antibodies) format: string
dsAttr415 (optional)
Double Manual muscle testing of 8 muscle groups format: double
dsAttr416 (optional)
Double SMA motor score (HMFSE, 0-66) (Hammersmith Functional Motor Scale-Expanded) format: double
dsAttr417 (optional)
String on tumor cells format: string
dsAttr418 (optional)
String seropositivity for SARS-CoV-2 IgG antibodies format: string
dsAttr419 (optional)
Double viral load format: double
dsAttr420 (optional)
String Anti-centromere antibodies in serum format: string
dsAttr421 (optional)
String Anti-Scl-70 antibodies in serum format: string
dsAttr422 (optional)
Double viral load i CSF format: double
dsAttr423 (optional)
String Anti-Ro52 antibodies seropositivity format: string
dsAttr424 (optional)
String anti-Ribonucleoprotein format: string
dsAttr425 (optional)
String Anti-Phospholipids i.e. for Lupus nephritis format: string
dsAttr426 (optional)
String WHO Class i.e. for Lupus nephritis format: string
dsAttr427 (optional)
String Non-renal SLEDAI i.e. for Lupus nephritis format: string
dsAttr428 (optional)
String anti Acetylcholine receptor in sera format: string
dsAttr429 (optional)
Double AchR Acetylcholine receptor in sera titer format: double
dsAttr430 (optional)
String Myasthenia Gravis Foundation of America format: string
dsAttr431 (optional)
String for Myastenia gravis format: string
dsAttr432 (optional)
String high-avidity antinuclear antibody (ANA) of the IgG isotype format: string
dsAttr433 (optional)
Double Autoimmune Bullous Skin Disorder Intensity Score format: double
dsAttr434 (optional)
Double Anti-Desmoglein1 antibody format: double
dsAttr435 (optional)
Double anti-Desmoglein3 AB format: double
dsAttr436 (optional)
Double FSS: Fatigue Severity Scale format: double
dsAttr437 (optional)
Double SpO2: oxygen saturation format: double
dsAttr438 (optional)
String HLA-B51 positivity format: string
dsAttr439 (optional)
Double Myasthenia Gravis Activities of Daily Living format: double
dsAttr440 (optional)
String For MDS format: string
dsAttr441 (optional)
String WPSS: WHO classification-based Prognostic Scoring System format: string
dsAttr442 (optional)
Double the total amount of iron in your blood plus the UIBC (Unsaturated iron-binding capacity) format: double
dsAttr443 (optional)
Double TSAT = transferrin saturation format: double
dsAttr444 (optional)
String IPSS-R (Revised International Prognostic Scoring System) format: string
dsAttr445 (optional)
String IPSS (International Prognostic Scoring System) format: string
dsAttr446 (optional)
Double Unsaturated Iron Binding Capacity format: double
dsAttr447 (optional)
Double Homeostasis model assessment of insulin resistance format: double
dsAttr448 (optional)
Double Homeostasis model assessment of insulin resistance format: double
dsAttr449 (optional)
Double Homeostasis model assessment of insulin resistance format: double
dsAttr450 (optional)
Double key features of acromegaly: signs and symptoms (S), associated comorbidities (A), GH levels (G), IGF-1 levels (I), and the Tumor format: double
dsAttr451 (optional)
Double Lung RV in liters format: double
dsAttr452 (optional)
Double Lung residual volume (%) format: double
dsAttr453 (optional)
Double The five-point Fleischner grading system offers the possibility to more precisely grade the visual severity of parenchymal emph format: double
dsAttr454 (optional)
Double Total lung capacity format: double
dsAttr455 (optional)
Double maximum expiratory flow at 25% of vital capacity format: double
dsAttr456 (optional)
Double maximum expiratory flow at 50% of vital capacity format: double
dsAttr457 (optional)
Double maximum expiratory flow at 75% of vital capacity format: double
dsAttr458 (optional)
String Alpha-1 antitrypsin genotype, i.e. ZZ, ZM etc. format: string
dsAttr459 (optional)
Double FEV1/FVC (% predicted) format: double
dsAttr460 (optional)
String French- American-British classification format: string
dsAttr461 (optional)
Double by FibroScan format: double
dsAttr462 (optional)
Double biochemical severity scoring system based on liver function tests in predicting the extent of liver fibrosis/cirrhosis format: double
dsAttr463 (optional)
String Smooth muscle antibodies (SMA) format: string
dsAttr464 (optional)
String IPSS-RA age-adjusted calculation of revised IPSS format: string

QueryDataHeader - Up

ColumnVariable (optional)
String column variable name
ColumnDesc (optional)
String column description

Species - Up

id
Long format: int64
name
String Species name available

TissueType - Up

id
Long format: int64
name
String Tissue name available